BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003F07SP1|AL425156
(988 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig204 1900 0.0
>3x_Contig204
Length = 1426
Score = 1900 bits (958), Expect = 0.0
Identities = 982/986 (99%), Gaps = 3/986 (0%)
Strand = Plus / Plus
Query: 1 ctcaactttcggggagaatcaatacatttcttttctgtgtcatactgtatcatacaatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ctcaactttcggggagaatcaatacatttcttttctgtgtcatactgtatcatacaatca 471
Query: 61 tctatagattgattgattacgtttctgaaaaacactggtgatgacgcataataatcttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 tctatagattgattgattacgtttctgaaaaacactggtgatgacgcataataatcttca 531
Query: 121 aatagacgagacgggctttgccaagttctggtagacgccggtgggttcagaccatcttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 aatagacgagacgggctttgccaagttctggtagacgccggtgggttcagaccatcttta 591
Query: 181 ttgaaatctttaggtgttgaaaaaatattgaatttcagaggagtgacagagctttcccta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 ttgaaatctttaggtgttgaaaaaatattgaatttcagaggagtgacagagctttcccta 651
Query: 241 ataggtgtctttgaattttgctggttaactgatggcagctgcagcttgttcatcggagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 ataggtgtctttgaattttgctggttaactgatggcagctgcagcttgttcatcggagat 711
Query: 301 acgggttcaaatgatgtgttgaaagaacacgaatattttttgaatttaggagaagagacg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 acgggttcaaatgatgtgttgaaagaacacgaatattttttgaatttaggagaagagacg 771
Query: 361 gcagcaaccattaaatcatcatattcatggttatgtgcactgacagagcgatggttaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 gcagcaaccattaaatcatcatattcatggttatgtgcactgacagagcgatggttaaat 831
Query: 421 ttcaacgggcccaccagatgactagagtcttgtcttttgaccatattttcatcttcgtaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 ttcaacgggcccaccagatgactagagtcttgtcttttgaccatattttcatcttcgtaa 891
Query: 481 tacaggaagtctttatccgtagccggaaactgatggcttccatgaccagcagcttcggcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 tacaggaagtctttatccgtagccggaaactgatggcttccatgaccagcagcttcggcg 951
Query: 541 tgatcacctaatcgtggc-gatgaaggtatattggttattgaagttgattcttcgtcacc 599
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 952 tgatcacctaatcgtggctgatgaaggtatattggttattgaagttgattcttcgtcacc 1011
Query: 600 gtcactgctttgatccaaggaagtatcacccgcgtcaccaatatcactcgatttgtcatc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 gtcactgctttgatccaaggaagtatcacccgcgtcaccaatatcactcgatttgtcatc 1071
Query: 660 catggtagaaattgaaaatgacttatttttccttttcgacttattgtacgaggcaattga 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 catggtagaaattgaaaatgacttatttttccttttcgacttattgtacgaggcaattga 1131
Query: 720 tgatccattaaaactggacgtggtactgccagcttcataaccatcatccaaattcacact 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 tgatccattaaaactggacgtggtactgccagcttcataaccatcatccaaattcacact 1191
Query: 780 cttgaatctttgtagctttaccttaaaatcatcaatggaaaaactttcatcattttttga 839
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1192 cttgaatctttgtagctttaccttaaaatcatcaatggaaaaactttcatca-tttttga 1250
Query: 840 agaacttggattcatacccaggtttaatttcccagaaatgtcccttcccgtccaaagatt 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1251 agaacttggattcatacccaggtttaatttcccagaaatgtcccttcccgtccaaagatt 1310
Query: 900 taccacctttaacaaacgcttcgttcaaagacaagttgtgcctaatagaattctgcc-ac 958
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 1311 taccacctttaacaaacgcttcgttcaaagacaagttgtgcctaatagaattcttccaac 1370
Query: 959 cagcatcttctcgcttataatagggg 984
||||||||||||||||||||||||||
Sbjct: 1371 cagcatcttctcgcttataatagggg 1396
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8871
Number of Sequences: 1807
Number of extensions: 8871
Number of successful extensions: 63
Number of sequences better than 1.0e-20: 1
length of query: 988
length of database: 10,358,551
effective HSP length: 16
effective length of query: 972
effective length of database: 10,329,639
effective search space: 10040409108
effective search space used: 10040409108
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)